Picornaviridae
Study Group
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Parechovirus A
Parechovirus B
 

New and Re-classified Types

Genus: Parechovirus

Species: Parechovirus A (formerly Human parechovirus)

New type Strain ID Proposer Supporting
data		 Accession Reference(s)
HPeV-3 A308/99 M. Ito CG AB084913 Ito et al., 2004
Can82853-01 CG AJ889918 Abed and Boivin, 2005
HPeV-4 K251176-02 Kimberley Benschop CG DQ315670 Benschop et al., 2006
T75-4077 CG AM235750 Al-Sunaidi et al., 2007
HPeV-5 CT86-6760*
(Connecticut/86)		 Glyn Stanway CG AF055846 Oberste et al., 1998
T92-15 Glyn Stanway CG AM235749 Al-Sunaidi et al., 2007
HPeV-6 NII561-2000 Masahiro Fujii CG AB252582 Watanabe et al., 2007
HPeV-7 PAK5045 Linlin Li CG EU556224 Li et al., 2009
HPeV-8 BR/217/2006 Jan Felix Drexler CG EU716175 Drexler et al., 2009
HPeV-9 BAN2004-10902 Steve Oberste VP1 JX219575 Nix et al., 2013
HPeV-10 BAN2004-10903 Steve Oberste VP1 JX219568 Nix et al., 2013
  LK-106   VP1 GQ402515 Pham et al., 2010
  LK-103   VP1 GQ402516 Pham et al., 2010
  LK-86   VP1(p) HQ163884 Pham et al., 2011
  LK-87   VP1(p) HQ163885 Pham et al., 2011
  LK-100   VP1(p) HQ163886 Pham et al., 2011
HPeV-11 BAN2004-10905 Steve Oberste VP1 JX219574 Nix et al., 2013
  LK-73   VP1(p) HQ163873 Pham et al., 2011
  LK-223   VP1(p) HQ163877 Pham et al., 2011
HPeV-12 BAN2004-10904 Steve Oberste VP1 JX219567 Nix et al., 2013
HPeV-13 BAN2005-10901 Steve Oberste VP1 JX219579 Nix et al., 2013
HPeV-14 451564 (NL, 2004) Kimberley Benschop VP1 FJ373179 Benschop et al., 2008
HPeV-15 BAN-11614 Steve Oberste VP1 JX219573 Nix et al., 2013
HPeV-16 BAN-11615 Steve Oberste VP1 JX219580 Nix et al., 2013
HPeV-17 M36/CI/2014   CG(p) KT319121 Böttcher et al., 2017
HPeV-18 GhanaA06 251   VP1 KY931658 Graul et al., 2017
  GhanaA29 768   VP1 KY931659 Graul et al., 2017
  GhanaA36 886   VP1 KY931660 Graul et al., 2017
HPeV-19 17-827 Sindy Böttcher CG(p) n/a Böttcher et al., unpub.
  P02-4058 Lieke Brouwer VP1 MH339678 Brouwer et al., unpub.

* formerly HPeV-2
CG, complete genome
n/a, not available

References

Abed, Y. and Boivin, G. (2005). Molecular characterization of a Canadian human parechovirus (HPeV)-3 isolate and its relationship to other HPeVs. J. Med. Virol. 77: 566-570.
 
Al-Sunaidi, M., Williams, C.H., Hughes, P.J., Schnurr, D.P. and Stanway G. (2007). Analysis of a new human parechovirus allows the definition of parechovirus types and the identification of RNA structural domains. J. Virol. 81: 1013-1021.
 
Benschop, K.S.M., Schinkel, J., Luken, M.E., van den Broek, P.J.M., Beersma, M.F.C., Menelik, N., van Eijk, H.W.M., Zaaijer, H.L., VandenBroucke-Grauls, C.M.J.E., Beld, M.G.H.M. and Wolthers, K.C. (2006). Fourth human parechovirus serotype. Emerging Infect. Dis. 12: 1572-1575.
 
Benschop, K., Thomas, X., Serpenti, C., Molenkamp, R. and Wolthers, K. (2008). High prevalence of human parechovirus (HPeV) genotypes in the Amsterdam region and identification of specific HPeV variants by direct genotyping of stool samples. J. Clin. Microbiol. 46: 3965-3970.

Böttcher, S., Obermeier, P.E., Diedrich, S., Kaboré, Y., D'Alfonso, R., Pfister, H., Kaiser, R. and Di Cristanziano, V. (2017). Genome sequence of novel human parechovirus type 17. Genome Announc. 5(8). pii: e01649-16.
 
Drexler, J.F., Grywna, K., Stöcker, A., Silva Almeida, P., Medrado Ribeiro, T.C., Eschbach-Bludau, M. Petersen, N., da Costa Ribeiro, Jr., H. and Drosten, C. (2009). Novel human parechovirus from Brazil. Emerg. Infect. Dis. 15: 310-313.

Graul S, Böttcher S, Eibach D, Krumkamp R, Käsmaier J, Adu-Sarkodie Y, May J, Tannich E, Panning M. High diversity of human parechovirus including novel types in stool samples from Ghanaian children. J Clin Virol. 2017 Nov;96:116-119. doi: 10.1016/j.jcv.2017.10.008. Epub 2017 Oct 18. PubMed PMID: 29055866.
 
Ito, M., Yamashita, T., Tsuzuki, H., Takeda, N. and Sakae, K. (2004). Isolation and identification of a novel human parechovirus. J. Gen. Virol. 85: 391-398.
 
Li, L., Victoria, J., Kapoor, A. and Delwart, E. (2009). Genomic characterization of a novel human parechovirus genotype. Emerg. Infect. Dis. 15: 288-291.

Nix, W.A., Khetsuriani, N., Peñaranda, S., Maher, K., Venczel, L., Cselkó, Z., Freire, M.C., Cisterna, D., Lema, C.L., Rosales, P., Rodriguez, J.R., Rodriguez, W., Halkyer, P., Ronveaux, O., Pallansch, M.A. and Oberste, M.S. (2013). Diversity of picornaviruses in rural Bolivia. J. Gen. Virol. 94: 2017-2028.
 
Oberste, M.S., Maher, K. and Pallansch, M.A. (1998). Complete sequence of echovirus 23 and its relationship to echovirus 22 and other human enteroviruses. Virus Research 56: 217-223.
 
Pham, N.T.K., Trinh, Q.D., Takanashi, S., Abeysekera, C., Abeygunawardene, A., Shimizu, H., Khamrin, P., Okitsu, S., Mizuguchi, M. and Ushijima H. (2010a). Novel human parechovirus, Sri Lanka. Emerg. Infect. Dis. 16: 130-132.
 
Pham, N.T., Takanashi, S., Tran, D.N., Trinh, Q.D., Abeysekera, C., Abeygunawardene, A., Khamrin, P., Okitsu, S., Shimizu, H., Mizuguchi, M. and Ushijima, H. (2011). Human parechovirus infection in children hospitalized with acute gastroenteritis in Sri Lanka. J. Clin. Microbiol. 49: 364-366.
 
Watanabe, K., Oie, M., Higuchi, M., Nishikawa, M. and Fujii, M. (2007). Isolation and characterization of novel human parechovirus from clinical samples. Emerg. Infect. Dis. 13: 889-895.