|
| |
Provisionally assigned human rhinovirus C types
(based only on VP4/VP2 sequences)
| Provisional type |
Virus name |
Accession
no. |
Submission date |
Variants |
Reference* |
Comments |
| HRV-C_pat1 |
NAT069 |
EF077256 |
20-Oct-06 |
21 |
Kistler
et al. (2007) |
Now HRV-C36 |
| HRV-C_pat2 |
NAT059 |
EF077260 |
20-Oct-06 |
8 |
Kistler et al. (2007) |
Now HRV-C37 |
| HRV-C_pat3 |
06-739b |
EU081790 |
03-Aug-07 |
15 |
Renwick et al. (2007) |
Now HRV-C35 |
| HRV-C_pat4 |
tu304 |
EU081791 |
03-Aug-07 |
13 |
Renwick et al. (2007) |
Now HRV-C38 |
| HRV-C_pat5 |
g2-11 |
EU081799 |
03-Aug-07 |
20 |
Renwick et al. (2007) |
Now HRV-C39 |
| HRV-C_pat6 |
g2-25 |
EU081802 |
03-Aug-07 |
29 |
Renwick et al. (2007) |
Now HRV-C40 |
| HRV-C_pat7 |
g2-23 |
EU081803 |
03-Aug-07 |
7 |
Renwick et al. (2007) |
Now HRV-C41 |
| HRV-C_pat8 |
g2-28 |
EU081805 |
03-Aug-07 |
11 |
Renwick et al. (2007) |
Now HRV-C42 |
| HRV-C_pat9 |
06-230 |
EU081807 |
03-Aug-07 |
13 |
Renwick et al. (2007) |
Now HRV-C43 |
| HRV-C_pat10 |
PNC86718 |
EU590054 |
25-Mar-08 |
14 |
Savolainen-Kopra et al.
(2009a) |
Now HRV-C53 |
| HRV-C_pat11 |
PNC40168 |
EU590061 |
25-Mar-08 |
5 |
Savolainen-Kopra et al.
(2009a) |
Now HRV-C44 |
| HRV-C_pat12 |
PNC40449 |
EU590064 |
25-Mar-08 |
5 |
Savolainen-Kopra et al.
(2009a) |
Now HRV-C45 |
| HRV-C_pat13 |
IN-36 |
EU697839 |
05-May-08 |
6 |
Briese et al. (2008) |
Now HRV-C49 |
| HRV-C_pat14 |
SA365412 |
EU697852 |
05-May-08 |
1 |
Briese et al. (2008) |
|
| HRV-C_pat15 |
HRV-CO-1368 |
EU743925 |
22-May-08 |
10 |
Dominguez et al. (2008) |
Now HRV-C51 |
| HRV-C_pat16 |
RV1250 |
EU752358 |
26-May-08 |
2 |
Miller et al. (2009a) |
|
| HRV-C_pat17 |
RV1039 |
EU752398 |
26-May-08 |
6 |
Miller et al. (2009a) |
|
| HRV-C_pat18 |
RV546 |
EU752412 |
26-May-08 |
21 |
Miller et al. (2009a) |
|
| HRV-C_pat19 |
China/GDFY100/2008 |
FJ598096 |
29-Dec-08 |
5 |
Wu et al., unpub. |
|
| HRV-C_pat20 |
202511 |
FJ615722 |
09-Jan-09 |
1 |
Miller et al. (2009b) |
|
| HRV-C_pat21 |
202092 |
FJ615737 |
09-Jan-09 |
4 |
Miller et al. (2009b) |
|
| HRV-C_pat22 |
202642 |
FJ615745 |
09-Jan-09 |
1 |
Miller et al. (2009b) |
|
| HRV-C_pat23 |
SO5986 |
FJ841957 |
17-Mar-09 |
2 |
Calvo et al. (2009) |
Now HRV-C50 |
| HRV-C_pat24 |
KR1868 |
FJ869923 |
27-Mar-09 |
1 |
Calvo et al. (2009) |
|
| HRV-C_pat25 |
KR2315 |
FJ869950 |
27-Mar-09 |
4 |
Calvo et al. (2009) |
Now HRV-C46 |
| HRV-C_pat26 |
K1091_301104 |
GQ466482 |
07-Aug-09 |
1 |
Savolainen-Kopra et al.
(2009c) |
Now HRV-C47 |
| HRV-C_pat27 |
PV68 |
GU214340 |
18-Nov-09 |
5 |
Piralla et al. (2009) |
|
| HRV-C_pat28 |
Cd08-1009-U |
HM347248 |
24-May-10 |
1 |
Tapparel et al., 2011 |
|
| HRV-C_pat29 |
|
|
|
|
|
Now HRV-C52 |
The proposal for the designation of HRV-C provisional types 1-28 has
been published (Simmonds
et al., 2010).
|
