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Human Parechovirus
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Human Parechovirus
Ljungan virus
 

New and Re-classified Types

Genus Parechovirus, species Human parechovirus

New type Strain ID Proposer Supporting
data
Accession Reference(s)
HPeV-3 A308/99 M. Ito CG AB084913 Ito et al., 2004
Can82853-01 CG AJ889918 Abed and Boivin, 2005
HPeV-4 K251176-02 Kimberley Benschop CG DQ315670 Benschop et al., 2006
T75-4077 CG AM235750 Al-Sunaidi et al., 2007
HPeV-5 CT86-6760*
(Connecticut/86)
Glyn Stanway CG AF055846 Oberste et al., 1998
T92-15 Glyn Stanway CG AM235749 Al-Sunaidi et al., 2007
HPeV-6 NII561-2000 Masahiro Fujii CG AB252582 Watanabe et al., 2007
HPeV-7 PAK5045 Linlin Li CG EU556224 Li et al., 2009
HPeV-8 BR/217/2006 Jan Felix Drexler CG EU716175 Drexler et al., 2009
HPeV-9 BAN2004-10902 Steve Oberste VP1 n/a Oberste et al., unpub.
HPeV-10 BAN2004-10903 Steve Oberste VP1 n/a Oberste et al., unpub.
  LK-106   VP1 GQ402515 Pham et al., 2010
  LK-103   VP1 GQ402516 Pham et al., 2010
  LK-86   VP1(p) HQ163884 Pham et al., 2011
  LK-87   VP1(p) HQ163885 Pham et al., 2011
  LK-100   VP1(p) HQ163886 Pham et al., 2011
HPeV-11 BAN2004-10905 Steve Oberste VP1 n/a Oberste et al., unpub.
  LK-73   VP1(p) HQ163873 Pham et al., 2011
  LK-223   VP1(p) HQ163877 Pham et al., 2011
HPeV-12 BAN2004-10904 Steve Oberste VP1 n/a Oberste et al., unpub.
HPeV-13 BAN2005-10901 Steve Oberste VP1 n/a Oberste et al., unpub.
HPeV-14 451564 (NL, 2004) Kimberley Benschop VP1 FJ373179 Benschop et al., 2008
HPeV-15 BAN-11614 Steve Oberste VP1 n/a Oberste et al., unpub.
HPeV-16 BAN-11615 Steve Oberste VP1 n/a Oberste et al., unpub.

* formerly HPeV-2
CG, complete genome
n/a, not available

References

Abed, Y. and Boivin, G. (2005). Molecular characterization of a Canadian human parechovirus (HPeV)-3 isolate and its relationship to other HPeVs. J. Med. Virol. 77: 566-570.
 
Al-Sunaidi, M., Williams, C.H., Hughes, P.J., Schnurr, D.P. and Stanway G. (2007). Analysis of a new human parechovirus allows the definition of parechovirus types and the identification of RNA structural domains. J. Virol. 81: 1013-1021.
 
Benschop, K.S.M., Schinkel, J., Luken, M.E., van den Broek, P.J.M., Beersma, M.F.C., Menelik, N., van Eijk, H.W.M., Zaaijer, H.L., VandenBroucke-Grauls, C.M.J.E., Beld, M.G.H.M. and Wolthers, K.C. (2006). Fourth human parechovirus serotype. Emerging Infect. Dis. 12: 1572-1575.
 
Benschop, K., Thomas, X., Serpenti, C., Molenkamp, R. and Wolthers, K. (2008). High prevalence of human parechovirus (HPeV) genotypes in the Amsterdam region and identification of specific HPeV variants by direct genotyping of stool samples. J. Clin. Microbiol. 46: 3965-3970.
 
Drexler, J.F., Grywna, K., Stöcker, A., Silva Almeida, P., Medrado Ribeiro, T.C., Eschbach-Bludau, M. Petersen, N., da Costa Ribeiro, Jr., H. and Drosten, C. (2009). Novel human parechovirus from Brazil. Emerg. Infect. Dis. 15: 310-313.
 
Ito, M., Yamashita, T., Tsuzuki, H., Takeda, N. and Sakae, K. (2004). Isolation and identification of a novel human parechovirus. J. Gen. Virol. 85: 391-398.
 
Li, L., Victoria, J., Kapoor, A. and Delwart, E. (2009). Genomic characterization of a novel human parechovirus genotype. Emerg. Infect. Dis. 15: 288-291.
 
Oberste, M.S., Maher, K. and Pallansch, M.A. (1998). Complete sequence of echovirus 23 and its relationship to echovirus 22 and other human enteroviruses. Virus Research 56: 217-223.
 
Pham, N.T.K., Trinh, Q.D., Takanashi, S., Abeysekera, C., Abeygunawardene, A., Shimizu, H., Khamrin, P., Okitsu, S., Mizuguchi, M. and Ushijima H. (2010a). Novel human parechovirus, Sri Lanka. Emerg. Infect. Dis. 16: 130-132.
 
Pham, N.T., Takanashi, S., Tran, D.N., Trinh, Q.D., Abeysekera, C., Abeygunawardene, A., Khamrin, P., Okitsu, S., Shimizu, H., Mizuguchi, M. and Ushijima, H. (2011). Human parechovirus infection in children hospitalized with acute gastroenteritis in Sri Lanka. J. Clin. Microbiol. 49: 364-366.
 
Watanabe, K., Oie, M., Higuchi, M., Nishikawa, M. and Fujii, M. (2007). Isolation and characterization of novel human parechovirus from clinical samples. Emerg. Infect. Dis. 13: 889-895.