Picornaviridae Study Group Pages Enterovirus genus
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Enterovirus genus
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New and Re-classified Types

Genus Enterovirus

New serotypes
New type Strain ID Species Proposer Supporting data Accession Reference(s)
EV-73 CA55-1988 HEV-B Mark Pallansch complete genome AF241359 Oberste et al., 2001
CA78-1480 P1 AF241361
OMA95-6498 P1 AF241362
CA54-4454 P1 AF241363
EV-74 USA/CA75-10213 HEV-B Mark Pallansch complete genome AY556057 Oberste et al., 2004
W553-130/99 VP1 AY208118 Norder et al., 2003
EV-75 USA/OK85-10362 HEV-B Mark Pallansch complete genome AY556070 Oberste et al., 2004
OK85-6388 partial VP1 AF152280 Oberste et al., 2000
CT87-7122 partial VP1 AF152254
CT87-7123 partial VP1 AF152255
VA86-6765 VP1 AF152298
FJ96-71 (China) VP1 AY570801 Yang et al., unpublished
EV-76 FRA91-10369 HEV-A Steve Oberste complete genome AY697458 Oberste et al., 2005
EV-77 Lafeuille; W543-122/99 HEV-B Helene Norder P1 AY208119 Norder et al., 2003
CF496-99 complete genome AJ493062 Bailly et al., 2004
USA/TX97-10394 complete genome AY843302 Oberste et al., 2007
EV-78 Agius; W137-126/99 HEV-B Helene Norder P1 AY208120 Norder et al., 2003
EV-79 USA/CA79-10244 HEV-B Steve Oberste VP1 n/a Oberste et al., 2007
USA/CA82-10385 P1 AY843309 Oberste et al., 2007
USA/CA79-10384 complete genome AY843297 Oberste et al., 2007
EV-80 USA/CA67-10246 HEV-B Steve Oberste VP1 n/a Oberste et al., 2007
OMA98-10388 P1 AY843310 Oberste et al., 2007
USA/CA67-10387 complete genome AY843298 Oberste et al., 2007
EV-81 USA/CA68-10248 HEV-B Steve Oberste VP1 n/a Oberste et al., 2007
USA/CA68-10389 complete genome AY843299 Oberste et al., 2007
EV-82 USA/CA74-10249 HEV-B Steve Oberste VP1 n/a Oberste et al., 2007
OMA98-10391 P1 AY843311 Oberste et al., 2007
USA/CA64-10390 complete genome AY843300 Oberste et al., 2007
EV-83 USA/CA76-10251 HEV-B Steve Oberste VP1 n/a Oberste et al., 2007
USA/CA76-10392 complete genome AY843301 Oberste et al., 2007
10505 partial VP1 AY919489 Oberste et al., 2006
10506 partial VP1 AY919490 Oberste et al., 2006
10574 partial VP1 AY919565 Oberste et al., 2006
EV-84 CIV2003-10603 HEV-B Steve Oberste complete genome DQ902712 Oberste et al., 2007
EV-85 BAN00-10353 HEV-B Steve Oberste complete genome AY843303 Oberste et al., 2007
EV-86 BAN00-10354 HEV-B Steve Oberste complete genome AY843304 Oberste et al., 2007
BAN99-10356 P1 AY843312 Oberste et al., 2007
10458b partial VP1 AY919444 Oberste et al., 2006
EV-87 BAN00-10256 HEV-B Steve Oberste VP1 n/a Oberste et al., 2007
BAN01-10396 complete genome AY843305 Oberste et al., 2007
EV-88 BAN01-10258 HEV-B Steve Oberste VP1 n/a Oberste et al., 2007
BAN01-10398 complete genome AY843306 Oberste et al., 2007
EV-89 BAN00-10359 HEV-A Steve Oberste complete genome AY697459 Oberste et al., 2005
BAN00-10360 P1 AY697472 Oberste et al., 2005
partial 3D AY697500 Oberste et al., 2005
EV-90 BAN99-10399 HEV-A* Steve Oberste complete genome AY697460 Oberste et al., 2005
F950027 (Netherlands) complete genome AY773285 van den Broek et al., unpublished
CAM1956 (Cambodia) complete genome AB192877 Shimizu et al., unpublished
BAN99-10260 VP1 n/a Oberste et al., unpublished
EV-91 BAN00-10406 HEV-A* Steve Oberste complete genome AY697461 Oberste et al., 2005
BAN00-10262 VP1 n/a Oberste et al., unpublished
BAN99-10407 P1 AY697476 Oberste et al., 2005
partial 3D AY697507 Oberste et al., 2005
EV-92 GA01-10263 HEV-A Steve Oberste VP1 n/a Oberste et al., unpublished
USA/GA99-RJg-7 CG EF667344 Oberste et al., unpublished
EV-93 38_03 HEV-B Helene Norder VP1 n/a Norder et al., unpublished
EV-94 E210 (Egypt) HEV-D Merja Roivainen CG DQ916376 Smura et al., 2007
EV-95 5-05 HEV-C Helene Norder VP1 n/a Norder et al., unpublished
EV-96 SVK03-24 HEV-C Merja Roivainen VP1 n/a Smura et al., unpublished
10488 VP1 AY919472 Oberste et al., 2006
10548c partial VP1 AY919538 Oberste et al., 2006
EV-97 FIN03-2875 HEV-B Merja Roivainen VP1 n/a Smura et al., unpublished
BAN99-10355 complete genome AY843307 Oberste et al., 2007
10533b VP1 AY919521 Oberste et al., 2006
10570b VP1 AY919561 Oberste et al., 2006
EV-98 92-1499 HEV-B Teruo Yamashita VP1 n/a Yamashita et al., unpublished
EV-99 10461-ban00 HEV-C Mark Pallansch VP1 n/a Brown et al., unpublished
EV-100 BAN00-10410 HEV-B Steve Oberste VP1 n/a Oberste et al., 2007
BAN2000-10500 complete genome DQ902713 Oberste et al., 2007
VP1 AY919484 Oberste et al., 2006
EV-101 CIV03-10361 HEV-B Steve Oberste complete genome AY843308 Oberste et al., 2007
EV-102 10424-BAN99 HEV-C Mark Pallansch VP1 n/a Brown et al., unpublished
EV-103 USA/GA99-POo-1 unassigned Mark Pallansch VP1 n/a Pallansch et al., unpublished
EV-104 CL-1231094 FL HEV-C Caroline Tapparel CG n/a Tapparel et al., unpublished
EV-105 TW/NTU07-1841 HEV-C Hui Ling Cheng &
Chuan Liang Kao 		VP1 n/a Cheng et al., unpublished
             

* but has a PV/HEV-C/HEV-D-like 5' UTR.
n/a, not available yet.
prototype strains are shown in bold type


Combining serotypes
Existing
serotype
designation		 New
serotype
designation		 Strain ID Species Proposer Supporting data Accession nos. Reference(s)
CV-A15 CV-A11 G-9/South Africa/50 HEV-C   Complete VP1's AF081305; AF081301 Oberste et al., 1999;
Brown et al., 2003
complete genomes AF499638; AF499636
CV-A18 CV-A13 G-13/South Africa/50 HEV-C Complete genomes AF499640; AF499637 Brown et al., 2003
HRV-87 EV-68 F02-3607-Corn HEV-D   5' UTR(p) AF108187 Andeweg et al., 1999
VP4/VP2(p) AY040243 Savolainen et al., 2002
5' UTR(p)
VP1(p)
3D(p)		 AY062273
AY062280
AY062283 		Blomqvist et al., 2002
VP4 AB079223 Ishiko et al., 2002
- SEV-A1 A2-plaque virus SEV-A   Complete genome
Complete VP1		 AF201894
 AF326759		 Liu et al., 2000
SV28 SEV-A1 9128 SEV-A   Complete VP1's
5' UTR (p)		 AF326757; AF326759
n/a		 Oberste et al, 2002;
Pöyry et al., 1999
SA4 SEV-A1 1715 UWB SEV-A   5' UTR (p) n/a Pöyry et al., 1999

References

Bailly, J.L., Cardoso, M.C. and Peigue-Lafeuille H. (2004). Isolation and identification of an enterovirus 77 recovered from a refugee child from Kosovo, and characterization of the complete virus genome. Virus Res. 99: 147-155.
Blomqvist S, Savolainen C, Raman L, Roivainen M, Hovi T. (2002). Human rhinovirus 87 and enterovirus 68 represent a unique serotype with rhinovirus and enterovirus features. J Clin Microbiol. 40: 4218-4223.
Brown, B., Oberste, M.S., Maher, K. and, Pallansch, M.A. (2003). Complete genomic sequencing shows that polioviruses and members of human enterovirus species C are closely related in the noncapsid coding region. J. Virol. 77: 8973-8984.
Ishiko, H., Miura, R., Shimada, Y., Hayashi, A., Nakajima, H., Yamazaki, S. and Takeda, N. (2002). Human rhinovirus 87 identified as human enterovirus 68 by VP4-based molecular diagnosis. Intervirology 45: 136-141.
Liu et al., 2000
Norder, H., Bjerregaard, L., Magnius, L., Lina, B., Aymard, M. and Chomel, J.J. (2003). Sequencing of 'untypable' enteroviruses reveals two new types, EV-77 and EV-78, within human enterovirus type B and substitutions in the BC loop of the VP1 protein for known types. J. Gen. Virol. 84: 827-836.
Oberste, M.S., Maher, K., Kilpatrick, D.R. and Pallansch, M.A. (1999). Molecular evolution of the human enteroviruses: correlation of serotype with VP1 sequence and application to picornavirus classification. J. Virol. 73: 1941-1948.
Oberste, M.S., Schnurr, D., Maher, K., Al-Busaidy, S. and Pallansch, M.A. (2001). Molecular identification of new picornaviruses and characterization of a proposed enterovirus 73 serotype. J. Gen. Virol. 82: 409-416.
Oberste et al, 2002
Oberste, M.S., Michele, S.M., Maher, K., Schnurr, D., Cisterna, D., Juntilla, N., Uddin, M., Chomel, J.J., Lau, C.S., Ridha, W., al-Busaidy, S., Norder, H., Magnius, L.O. and Pallansch, M.A. (2004). Molecular identification and characterization of two proposed new enterovirus serotypes, EV74 and EV75. J. Gen. Virol. 85: 3205-3212.
Oberste, M.S., Maher, K., Michele, S.M., Belliot, G., Uddin, M. and Pallansch, M.A. (2005). Enteroviruses 76, 89, 90 and 91 represent a novel group within the species Human enterovirus A. J. Gen. Virol. 86: 445-451.
Oberste, M.S., Maher, K., Williams, A.J., Dybdahl-Sissoko, N., Brown, B.A., Gookin, M.S., Penaranda, S., Mishrik, N., Uddin, M. and Pallansch, M.A. (2006). Species-specific RT-PCR amplification of human enteroviruses: a tool for rapid species identification of uncharacterized enteroviruses J. Gen. Virol. 87: 119-128.
Oberste, M.S., Maher, K., Nix, W.A., Michele, S.M., Uddin, M., Schnurr, D., al-Busaidy, S., Akoua-Koffi, C. and Pallansch, M.A. (2007). Molecular identification of 13 new enterovirus types, EV79-88, EV97, and EV100-101, members of the species Human Enterovirus B. Virus Res. 128: 34-42.
Pöyry et al., 1999
Savolainen, C., Blomqvist, S., Mulders, M.N. and Hovi, T. (2002). Genetic clustering of all 102 human rhinovirus prototype strains: serotype 87 is close to human enterovirus 70. J. Gen. Virol. 83: 333-340.
van den Broek, P., Shimizu, H., Maas, J., Li, C., Utama, A., Miyamura, T., Luken, M., Beld, M., Berkhout, B., van der Hoek, L. and Mang, R. A novel human enterovirus serotype in fecal samples from HIV-1 infected persons and patients with acute flaccid paralysis. Unpublished.
Yang, X.-H., Pang, W.-Y.,  Xu, W.-B.,  Mao, N.-Y. and Yan, Y.-S. A preliminary study on a suspicious new type enteroviruses. Unpublished. [EPI, Fujian CDC, 76 Jing Tai Road, FuZhou, Fujian 350001, China]